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Species belonging to selected taxon:

Phaseolus coccineus



ABOUT THIS RECORD

ID: MNEST001919
species: Phaseolus coccineus
miRNA family: MIR235
source: miRNEST

Taxonomy by NCBI:
Phaseolus coccineus Phaseolus Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTATTGTGTTGTGTTTGTTGT

miRNA*
AAGGAATACACGAAGTAGGT

mismatches: 3
bulges: 1

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pre-miRNA
CAAGAAAGGAATACACGAAGTAGGTGCATTTGGTGTTGCTGCCTTCTGAAGGGGACCTGCAGAATAAAACCAGTGAATAAGACTTTTATTGTGTTGTGTT
TGTTGT
TTGT


dot-bracket secondary structure
((((.((.(((((((((.((((((....((((...((((((..(((((.(((...))).)))))......)))))).))))...)))))).)).))))))
).)).)
))).



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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